PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0079s0500.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 430aa    MW: 47569.7 Da    PI: 4.9846
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0079s0500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1042e-32571961128
                     NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra 77 
                             lp G++F+P+d+e++++ L +kv +        ++  e+i++v+    i++++P++Lp  vk++ +  +fF+++ k+y+tg+rk+r+
  SapurV1A.0079s0500.1.p  57 LPGGVKFDPSDQEIIWH-LLAKVGNGGikphpfIK--EFIPTVEnddgICYTHPQNLP-GVKQDGSISHFFHRAIKAYNTGTRKRRK 139
                             689************66.55566555535654322..33444422345**********.677777888******************9 PP

                     NAM  78 tk.....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                             ++     + +W++tg++k+v+  +g ++g+kk++v+y  + r  k+ekt+Wvmh+y+l
  SapurV1A.0079s0500.1.p 140 IQggdfgDVRWHKTGRTKPVIL-DGVQKGCKKIMVLYtsTVRGGKAEKTNWVMHQYHL 196
                             7734444567************.99************5545888999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.27E-3842215IPR003441NAC domain
PROSITE profilePS5100529.98557215IPR003441NAC domain
PfamPF023656.0E-1459196IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MAGPWLVDGN RFATKIKSAS SASNLEGVAW KSDPCKTCPN CHHVIDNSDV VQEWPGLPGG  60
VKFDPSDQEI IWHLLAKVGN GGIKPHPFIK EFIPTVENDD GICYTHPQNL PGVKQDGSIS  120
HFFHRAIKAY NTGTRKRRKI QGGDFGDVRW HKTGRTKPVI LDGVQKGCKK IMVLYTSTVR  180
GGKAEKTNWV MHQYHLGTGE DERDGEDVVS KIFYQQQATN KGEKPEEDLS EIANAVVVKV  240
DPVTPKSITP DPPRAERRCQ DFDSGKKSTN VCTEPCAEHS GVENLEEANF QHESPCYNYQ  300
PEMENHVDQM VGDNDNCADE GTKWWDSESQ HLLDSQQLVE GLSLCDEFLQ SQSPSDGGHG  360
RTGASGKSGL SDYAHLGPDH LKKDLEECQN LELDPANIEL DTPPEFRLSQ LEFGSQDSFM  420
AWGEGRVAD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002311435.10.0hypothetical protein POPTR_0008s11550g
SwissprotQ6NQK21e-176NAC8_ARATH; NAC domain-containing protein 8
TrEMBLB9HIY70.0B9HIY7_POPTR; Uncharacterized protein
STRINGPOPTR_0008s11550.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56623354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-178NAC family protein